tool description and rag update

app.py

@@ -1943,6 +1943,37 @@ def _collection_effective(name: str) -> str:
         return name
     return _collection_versioned(name)
 
+async def t_run_shell(args: dict) -> dict:
+    cmd = args["command"]; timeout = int(args.get("timeout", 600))
+    BAN_RM=False
+    if BAN_RM and re.search(r"\brm\s+-", cmd):
+        return {"exit_code": 1, "stdout": "", "stderr": "rm is verboden", "duration": 0.0, "log_path": ""}
+    start = time.time()
+    proc = await asyncio.create_subprocess_shell(cmd, stdout=asyncio.subprocess.PIPE, stderr=asyncio.subprocess.PIPE)
+    try:
+        #out, err = await asyncio.wait_for(proc.communicate(), timeout=timeout)
+        # Lees stdout en stderr apart (in bytes)
+        out_bytes = await asyncio.wait_for(proc.stdout.read(), timeout=timeout)
+        err_bytes = await asyncio.wait_for(proc.stderr.read(), timeout=timeout)
+
+        # Splits stdout en stderr naar regels
+        stdout_lines = out_bytes.decode(errors="ignore").splitlines()
+        stderr_lines = err_bytes.decode(errors="ignore").splitlines()
+        return {
+            "exit_code": proc.returncode,
+            "stdout_lines": stdout_lines,
+            "stderr_lines": stderr_lines,
+            "duration": time.time() - start,
+            "log_path": "",
+            "merge_stderr_used": False
+        }
+    except asyncio.TimeoutError:
+        try: proc.kill()
+        except Exception: pass
+        return {"exit_code": -1, "stdout": "", "stderr": "timeout", "duration": time.time()-start, "log_path": ""}
+    #return {"exit_code": proc.returncode, "stdout": out.decode(errors="ignore"), "stderr": err.decode(errors="ignore"), "duration": time.time()-start, "log_path": ""}
+
+
 async def _execute_tool(name: str, args: dict) -> dict:
     logger.info("toolcall: "+str(name)+" ("+str(args)+")")
     if name == "repo_grep":
@@ -2019,6 +2050,17 @@ async def _execute_tool(name: str, args: dict) -> dict:
         })
         return out
     if name == "rag_query":
+        out= await run_in_threadpool(_rag_index_repo_sync, **{
+            "repo_url": args.get("repo",""),
+            "branch": "main",
+            "profile": "auto",
+            "include": "",
+            "exclude_dirs": "",
+            "chunk_chars": 3000,
+            "overlap": 400,
+            "collection_name": "code_docs",
+            "force": False,
+        })
         out = await rag_query_api(
             query=args.get("query",""),
             n_results=int(args.get("n_results",5)),
@@ -2029,6 +2071,18 @@ async def _execute_tool(name: str, args: dict) -> dict:
         )
         return out
 
+    # Console tools
+    if name == "run_shell":
+        # Search the web using SearXNG and get the content of the relevant pages.
+        out=json.dumps(await t_run_shell(args), ensure_ascii=False)
+        return out
+
+    # Repo
+    if name == "repo_qa":
+        # High-level QA over een specifieke repo.
+        out=json.dumps(await repo_qa_answer(repo_hint=args.get("repo_hint"),question=args.get("question"),branch=args.get("branch","main"),n_ctx=10), ensure_ascii=False)
+        return out
+        
     # Web tools
     if name == "web_search_xng":
         # Search the web using SearXNG and get the content of the relevant pages.
@@ -2136,9 +2190,13 @@ async def _execute_tool(name: str, args: dict) -> dict:
 
     raise HTTPException(status_code=400, detail=f"Unknown tool: {name}")
 
+"""
+
+"""
+
 TOOLS_REGISTRY = {
     "repo_grep": {
-        "description": "Zoek exact(e) tekst in een git repo (fast grep-achtig).",
+        "description": "Zoek een specifieke exacte tekst in een file in een git repo (fast grep-achtig).",
         "parameters": {
             "type":"object",
             "properties":{
@@ -2181,7 +2239,7 @@ TOOLS_REGISTRY = {
         }
     },
     "rag_query": {
-        "description": "Zoek in de RAG-collectie en geef top-N passages (hybride rerank).",
+        "description": "Zoek korte text in de RAG-collectie en geef top-N passages (hybride rerank). (! first call rag_index_repo !)",
         "parameters": {
             "type":"object",
             "properties":{
@@ -2211,6 +2269,25 @@ TOOLS_REGISTRY = {
           "url": {"type": "string"},
         },"required":["url"]}
     },
+    "run_shell": {
+        "description": "Voer een shell-commando uit (stdout/stderr). (for simple commands)",
+        "parameters":{
+            "type":"object",
+            "properties":{
+                "command":{"type":"string"},
+                "timeout":{"type":"integer","default":600}
+        },"required":["command"]}
+    },
+    "repo_qa": {
+        "description": "High-level QA over een specifieke repo. (incl. RAG,clone,summary,context fuctionalities). Repo hint graag als full url met .git ",
+        "parameters":{
+            "type":"object",
+            "properties":{
+                "repo_hint":{"type":"string"},
+                "question":{"type":"string"},
+                "branch":{"type":"string"},
+        },"required":["repo_hint","question"]}
+    },
     "summarize_text": {
         "description": "Vat tekst samen in bullets met inleiding en actiepunten.",
         "parameters": {"type":"object","properties":{
@@ -2490,6 +2567,10 @@ def _normalize_tools_and_choice(body: dict) -> None:
                 body["tool_choice"] = {"type": "function", "function": {"name": fc["name"]}}
             body.pop("function_call", None)
 
+@app.post("/v1/completions")
+async def openai_completions(body: dict = Body(...), request: Request = None):
+    out = await openai_chat_completions(body,request)
+    return out
 
 @app.post("/v1/chat/completions")
 async def openai_chat_completions(body: dict = Body(...), request: Request = None):
@@ -3730,8 +3811,7 @@ async def rag_query_api(
     if repo:
         # Accepteer zowel 'repo' (basename) als 'repo_full' (owner/repo)
         base = repo.rsplit("/", 1)[-1]
-        where = {"$or": [
-            {"repo": {"$eq": base}},
+        where = {"$and": [
             {"repo_full": {"$eq": repo}}
         ]}
     if profile: where["profile"] = {"$eq": profile}